TAP HMG in Setaria viridis

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

HMG_box
ARID
YABBY

(Domain names are clickable)



List of proteins (10)

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namename additionClick button to show/hide sequence: Download sequence?
Sevir.1G012800.1.ppacid=32666927 transcript=Sevir.1G012800.1 locus=Sevir.1G012800 ID=Sevir.1G012800.1.v1.1 annot-version=v1.1
Sevir.1G272500.1.ppacid=32663976 transcript=Sevir.1G272500.1 locus=Sevir.1G272500 ID=Sevir.1G272500.1.v1.1 annot-version=v1.1
Sevir.2G311400.1.ppacid=32639087 transcript=Sevir.2G311400.1 locus=Sevir.2G311400 ID=Sevir.2G311400.1.v1.1 annot-version=v1.1
Sevir.3G110400.1.ppacid=32675086 transcript=Sevir.3G110400.1 locus=Sevir.3G110400 ID=Sevir.3G110400.1.v1.1 annot-version=v1.1
Sevir.3G110500.1.ppacid=32678726 transcript=Sevir.3G110500.1 locus=Sevir.3G110500 ID=Sevir.3G110500.1.v1.1 annot-version=v1.1
Sevir.4G299800.1.ppacid=32646069 transcript=Sevir.4G299800.1 locus=Sevir.4G299800 ID=Sevir.4G299800.1.v1.1 annot-version=v1.1
Sevir.5G129400.1.ppacid=32671890 transcript=Sevir.5G129400.1 locus=Sevir.5G129400 ID=Sevir.5G129400.1.v1.1 annot-version=v1.1
Sevir.5G265200.1.ppacid=32674351 transcript=Sevir.5G265200.1 locus=Sevir.5G265200 ID=Sevir.5G265200.1.v1.1 annot-version=v1.1
Sevir.6G001300.1.ppacid=32643440 transcript=Sevir.6G001300.1 locus=Sevir.6G001300 ID=Sevir.6G001300.1.v1.1 annot-version=v1.1
Sevir.7G211900.1.ppacid=32661846 transcript=Sevir.7G211900.1 locus=Sevir.7G211900 ID=Sevir.7G211900.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum